4U6Q Oxidoreductase date Jul 29, 2014
title Ctbp1 Bound To Inhibitor 2-(Hydroxyimino)-3-Phenylpropanoic
authors B.J.Hilbert, B.L.Morris, K.C.Ellis, J.L.Paulsen, C.A.Schiffer, S.R.Grossman, W.E.Royer Jr.
compound source
Molecule: C-Terminal-Binding Protein 1
Chain: A
Fragment: Nad Nucleotide Binding Residues 28-353
Synonym: Ctbp1
Ec: 1.1.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ctbp1, Ctbp
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_variant: Ril+
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 64 2 2
R_factor 0.204 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.000 84.000 159.472 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand 3CR, CA, FMT, NAI enzyme Oxidoreductase E.C.1.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure-Guided Design of a High Affinity Inhibitor to Human CtBP., Hilbert BJ, Morris BL, Ellis KC, Paulsen JL, Schiffer CA, Grossman SR, Royer WE Jr, ACS Chem Biol. 2015 Jan 30. PMID:25636004
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (4u6q.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 4U6Q
  • CSU: Contacts of Structural Units for 4U6Q
  • Structure Factors (349 Kb)
  • Retrieve 4U6Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U6Q from S2C, [Save to disk]
  • Re-refined 4u6q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U6Q in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U6Q
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4U6Q, from MSDmotif at EBI
  • Fold representative 4u6q from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u6q_A] [4u6q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4U6Q
  • Community annotation for 4U6Q at PDBWiki (http://pdbwiki.org)

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