4U6R Crystal structure of human IRE1 cytoplasmic domains in complex with a sulfonamide inhibitor. date
authors Mohr, C.
compound source
symmetry
R_factor
R_Free 0.24607
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 3E4, EDO, EPE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceUnfolded Protein Response in Cancer: IRE1alpha Inhibition by Selective Kinase Ligands Does Not Impair Tumor Cell Viability., Harrington PE, Biswas K, Malwitz D, Tasker AS, Mohr C, Andrews KL, Dellamaggiore K, Kendall R, Beckmann H, Jaeckel P, Materna-Reichelt S, Allen JR, Lipford JR, ACS Med Chem Lett. 2014 Sep 24;6(1):68-72. doi: 10.1021/ml500315b. eCollection, 2015 Jan 8. PMID:25589933
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (143 Kb) [Save to disk]
  • Biological Unit Coordinates (4u6r.pdb1.gz) 137 Kb
  • LPC: Ligand-Protein Contacts for 4U6R
  • CSU: Contacts of Structural Units for 4U6R
  • Structure Factors (382 Kb)
  • Retrieve 4U6R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U6R from S2C, [Save to disk]
  • Re-refined 4u6r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U6R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U6R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U6R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u6r] [4u6r_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4U6R: [PUG] [STYKc ] by SMART
  • Other resources with information on 4U6R
  • Community annotation for 4U6R at PDBWiki (http://pdbwiki.org)

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