4U6X Crystal Structure of HLA-A*0201 in complex with ALQDA, a 15 mer self-peptide date
authors Gras, S., Chabrol, E., Rossjohn, J.
compound source
symmetry
R_factor
R_Free 0.2016
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.68
ligand CL, MG, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
B
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    • Primary referenceNaturally Processed Non-Canonical HLA-A*02:01 Presented Peptides., Hassan C, Chabrol E, Jahn L, Kester MG, de Ru AH, Drijfhout JW, Rossjohn J, Falkenburg JH, Heemskerk MH, Gras S, van Veelen PA, J Biol Chem. 2014 Dec 12. pii: jbc.M114.607028. PMID:25505266
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (4u6x.pdb1.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 4U6X
  • CSU: Contacts of Structural Units for 4U6X
  • Structure Factors (832 Kb)
  • Retrieve 4U6X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U6X from S2C, [Save to disk]
  • Re-refined 4u6x structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4U6X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4U6X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U6X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u6x_B] [4u6x_P] [4u6x] [4u6x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4U6X: [IGc1 ] by SMART
    • Other resources with information on 4U6X
  • Community annotation for 4U6X at PDBWiki (http://pdbwiki.org)

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