4U86 Human Pin1 with cysteine sulfonic acid 113 date
authors Li, W., Zhang, Y.
compound source
symmetry
R_factor
R_Free 0.23073
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand 1PG, OCS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease., Chen CH, Li W, Sultana R, You MH, Kondo A, Shahpasand K, Kim BM, Luo ML, Nechama M, Lin YM, Yao Y, Lee TH, Zhou XZ, Swomley AM, Allan Butterfield D, Zhang Y, Lu KP, Neurobiol Dis. 2015 Apr;76:13-23. doi: 10.1016/j.nbd.2014.12.027. Epub 2015 Jan, 6. PMID:25576397
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (4u86.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 4U86
  • CSU: Contacts of Structural Units for 4U86
  • Structure Factors (539 Kb)
  • Retrieve 4U86 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U86 from S2C, [Save to disk]
  • Re-refined 4u86 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4U86 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4U86
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U86, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u86_A] [4u86]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4U86: [WW ] by SMART
    • Other resources with information on 4U86
  • Community annotation for 4U86 at PDBWiki (http://pdbwiki.org)

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