4UBJ KINETIC CRYSTALLOGRAPHY OF ALPHA_E7-CARBOXYLESTERSE FROM LUCILLA CUPRINA - ABSORBED X-RAY DOSE 5.55 MGy at 100K date
authors Jackson, C.J., Carr, P.D., Weik, M., Huber, T., Meirelles, T., Correy, G.
compound source
symmetry
R_factor
R_Free 0.2336
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand DPF enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceMapping the Accessible Conformational Landscape of an Insect Carboxylesterase Using Conformational Ensemble Analysis and Kinetic Crystallography., Correy GJ, Carr PD, Meirelles T, Mabbitt PD, Fraser NJ, Weik M, Jackson CJ, Structure. 2016 Jun 7;24(6):977-87. doi: 10.1016/j.str.2016.04.009. Epub 2016 May, 19. PMID:27210287
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (4ubj.pdb1.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4UBJ
  • CSU: Contacts of Structural Units for 4UBJ
  • Structure Factors (271 Kb)
  • Retrieve 4UBJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UBJ from S2C, [Save to disk]
  • Re-refined 4ubj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4UBJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4UBJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ubj] [4ubj_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4UBJ
  • Community annotation for 4UBJ at PDBWiki (http://pdbwiki.org)

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