OCA Atlas for 4UD1

4UD1

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

GOL, IMD, NH4

enzyme

Gene
Ontology

Chain	Function	Process	Component
C, E, D, B, A

Primary reference

Structural characterization of the N-terminal part of the MERS-CoV nucleocapsid by X-ray diffraction and small-angle X-ray scattering., Papageorgiou N, Lichiere J, Baklouti A, Ferron F, Sevajol M, Canard B, Coutard B, Acta Crystallogr D Struct Biol. 2016 Feb;72(Pt 2):192-202. doi:, 10.1107/S2059798315024328. Epub 2016 Jan 22. PMID:26894667

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (213 Kb) [Save to disk]

Biological Unit Coordinates (4ud1.pdb1.gz) 45 Kb

Biological Unit Coordinates (4ud1.pdb2.gz) 45 Kb

Biological Unit Coordinates (4ud1.pdb3.gz) 45 Kb

Biological Unit Coordinates (4ud1.pdb4.gz) 39 Kb

Biological Unit Coordinates (4ud1.pdb5.gz) 38 Kb

LPC: Ligand-Protein Contacts for 4UD1

CSU: Contacts of Structural Units for 4UD1

Structure Factors (537 Kb)

Retrieve 4UD1 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4UD1 from S2C, [Save to disk]

Re-refined 4ud1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4UD1 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ud1] [4ud1_A] [4ud1_B] [4ud1_C] [4ud1_D] [4ud1_E]

SWISS-PROT database:

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