4UFT Rna Binding Protein date Mar 19, 2015
title Structure Of The Helical Measles Virus Nucleocapsid
authors I.Gutsche, A.Desfosses, G.Effantin, W.L.Ling, M.Haupt, R.W.H.Ruig C.Sachse, G.Schoehn
compound source
Molecule: Nucleoprotein
Chain: B
Engineered: Yes
Other_details: Nucleoprotein Was Partially Digested With Tr
Organism_scientific: Measles Virus Strain Halle
Organism_taxid: 11236
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf21

Molecule: 5'-R(Cpcpcpcpcpcp)-3'
Chain: R

Organism_scientific: Spodoptera Frugiperda
Organism_common: Fall Armyworm
Organism_taxid: 7108
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.30 Å
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceNear-atomic cryo-EM structure of the helical measles virus nucleocapsid., Gutsche I, Desfosses A, Effantin G, Ling WL, Haupt M, Ruigrok RW, Sachse C, Schoehn G, Science. 2015 Apr 16. pii: aaa5137. PMID:25883315
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4uft.pdb1.gz) 2026 Kb
  • CSU: Contacts of Structural Units for 4UFT
  • Retrieve 4UFT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UFT from S2C, [Save to disk]
  • View 4UFT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4UFT
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4UFT, from MSDmotif at EBI
  • Fold representative 4uft from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4uft_R] [4uft] [4uft_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4UFT
  • Community annotation for 4UFT at PDBWiki (http://pdbwiki.org)

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