4UIJ Crystal structure of the BTB domain of KCTD13 date
authors Pinkas, D.M., Sanvitale, C.E., Sorell, F.J., Solcan, N., Goubin, S., Canning, P., Williams, E., Chaikuad, A., Clarke, S.E.Dixon., Tallant, C., Fonseca, M., Chalk, R., Doutch, J., Krojer, T., Burgess-Brown, N.A., Delft, F.von., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.
compound source
symmetry
R_factor
R_Free 0.2787
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
ligand CL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases., Pinkas DM, Sanvitale CE, Bufton JC, Sorrell FJ, Solcan N, Chalk R, Doutch J, Bullock AN, Biochem J. 2017 Nov 1;474(22):3747-3761. doi: 10.1042/BCJ20170527. PMID:28963344
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (4uij.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (4uij.pdb2.gz) 32 Kb
  • Biological Unit Coordinates (4uij.pdb3.gz) 31 Kb
  • Biological Unit Coordinates (4uij.pdb4.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 4UIJ
  • CSU: Contacts of Structural Units for 4UIJ
  • Structure Factors (714 Kb)
  • Retrieve 4UIJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UIJ from S2C, [Save to disk]
  • Re-refined 4uij structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4UIJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4UIJ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4uij_A] [4uij_B] [4uij_D] [4uij_C] [4uij]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4UIJ: [BTB ] by SMART
    • Other resources with information on 4UIJ
  • Community annotation for 4UIJ at PDBWiki (http://pdbwiki.org)

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