4UPE date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, CSX, F3S, FCO, GOL, MES, NI, PO4, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


R, S, Q


Primary referenceCrystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states., Volbeda A, Martin L, Barbier E, Gutierrez-Sanz O, De Lacey AL, Liebgott PP, Dementin S, Rousset M, Fontecilla-Camps JC, J Biol Inorg Chem. 2014 Oct 15. PMID:25315838
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (818 Kb) [Save to disk]
  • Biological Unit Coordinates (4upe.pdb1.gz) 274 Kb
  • Biological Unit Coordinates (4upe.pdb2.gz) 275 Kb
  • Biological Unit Coordinates (4upe.pdb3.gz) 275 Kb
  • LPC: Ligand-Protein Contacts for 4UPE
  • CSU: Contacts of Structural Units for 4UPE
  • Structure Factors (3143 Kb)
  • Retrieve 4UPE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UPE from S2C, [Save to disk]
  • Re-refined 4upe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4UPE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4upe] [4upe_A] [4upe_B] [4upe_C] [4upe_Q] [4upe_R] [4upe_S]
  • SWISS-PROT database:

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