4UTR	Crystal structure of zebrafish Sirtuin 5 in complex with glutarylated CPS1-peptide	date
authors	Pannek, M., Gertz, M., Steegborn, C.
compound		source
symmetry		R_factor R_Free 0.26170
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.90
ligand	BEZ, DMS, EDO, GUA, NA, ZN	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Chemical Probing of the Human Sirtuin 5 Active Site Reveals Its Substrate Acyl Specificity and Peptide-Based Inhibitors., Roessler C, Nowak T, Pannek M, Gertz M, Nguyen GT, Scharfe M, Born I, Sippl W, Steegborn C, Schutkowski M, Angew Chem Int Ed Engl. 2014 Aug 11. doi: 10.1002/anie.201402679. PMID:25111069

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk] Biological Unit Coordinates (4utr.pdb1.gz) 88 Kb Biological Unit Coordinates (4utr.pdb2.gz) 86 Kb LPC: Ligand-Protein Contacts for 4UTR CSU: Contacts of Structural Units for 4UTR Structure Factors (148 Kb) Retrieve 4UTR in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4UTR from S2C, [Save to disk] Re-refined 4utr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4UTR in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4UTR

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4UTR, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4utr_C] [4utr_A] [4utr_B] [4utr] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4UTR: [ZnF_C2HC ] by SMART

Other resources with information on 4UTR

Community annotation for 4UTR at PDBWiki (http://pdbwiki.org)

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