4UUV Structure of the DNA binding ETS domain of human ETV4 in complex with DNA date
authors Newman, J.A., Cooper, C.D.O., Kopec, J., Delft, F.von., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Gileadi, O.
compound source
symmetry
R_factor
R_Free 0.2480
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
Gene
Ontology
ChainFunctionProcessComponent
S, A, J, M, D, P, G, V


Primary referenceStructures of the Ets Domains of Transcription Factors ETV1, ETV4, ETV5 and FEV: Determinants of DNA Binding and Redox Regulation by Disulfide bond formation., Cooper CD, Newman JA, Aitkenhead H, Allerston CK, Gileadi O, J Biol Chem. 2015 Apr 12. pii: jbc.M115.646737. PMID:25866208
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (191 Kb) [Save to disk]
  • Biological Unit Coordinates (4uuv.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (4uuv.pdb2.gz) 48 Kb
  • Biological Unit Coordinates (4uuv.pdb3.gz) 48 Kb
  • Biological Unit Coordinates (4uuv.pdb4.gz) 49 Kb
  • CSU: Contacts of Structural Units for 4UUV
  • Structure Factors (1669 Kb)
  • Retrieve 4UUV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UUV from S2C, [Save to disk]
  • Re-refined 4uuv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4UUV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4UUV
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4UUV, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4uuv_J] [4uuv_I] [4uuv_T] [4uuv_D] [4uuv_L] [4uuv_B] [4uuv_N] [4uuv_R] [4uuv_E] [4uuv_G] [4uuv_K] [4uuv_S] [4uuv_M] [4uuv_C] [4uuv_U] [4uuv] [4uuv_V] [4uuv_F] [4uuv_P] [4uuv_X] [4uuv_A] [4uuv_W] [4uuv_O] [4uuv_Q] [4uuv_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4UUV: [ETS ] by SMART
  • Other resources with information on 4UUV
  • Community annotation for 4UUV at PDBWiki (http://pdbwiki.org)

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