4UZ0 Apoptosis date Sep 04, 2014
title Crystal Structure Of Apoptosis Repressor With Card (Arc)
authors S.H.Kim, J.H.Jeong, T.H.Jang, Y.G.Kim, H.H.Park
compound source
Molecule: Nucleolar Protein 3
Chain: A, B
Synonym: Apoptosis Repressor With Card, Muscle-Enriched Cyt Protein, Myp, Nucleolar Protein Of 30 Kda, Nop30, Apoptosis
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65
R_factor 0.170 R_Free 0.200
crystal
cell
length a length b length c angle alpha angle beta angle gamma
99.351 99.351 51.102 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
ligand GOL, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of caspase recruiting domain (CARD) of apoptosis repressor with CARD (ARC) and its implication in inhibition of apoptosis., Jang TH, Kim SH, Jeong JH, Kim S, Kim YG, Park HH, Sci Rep. 2015 Jun 3;5:9847. doi: 10.1038/srep09847. PMID:26038885
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (4uz0.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (4uz0.pdb2.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 4UZ0
  • CSU: Contacts of Structural Units for 4UZ0
  • Structure Factors (194 Kb)
  • Retrieve 4UZ0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4UZ0 from S2C, [Save to disk]
  • Re-refined 4uz0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4UZ0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4UZ0
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4uz0 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4uz0_B] [4uz0_A] [4uz0]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4UZ0: [CARD ] by SMART
  • Other resources with information on 4UZ0
  • Community annotation for 4UZ0 at PDBWiki (http://pdbwiki.org)

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