4V01 FGFR1 in complex with ponatinib (co-crystallisation). date
authors Tucker, J., Klein, T., Breed, J., Breeze, A., Overman, R., Phillips, C., Norman, R.A.
compound source
symmetry
R_factor
R_Free 0.2378
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.33
ligand 0LI, EDO, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Insights into FGFR Kinase Isoform Selectivity: Diverse Binding Modes of AZD4547 and Ponatinib in Complex with FGFR1 and FGFR4., Tucker JA, Klein T, Breed J, Breeze AL, Overman R, Phillips C, Norman RA, Structure. 2014 Dec 2;22(12):1764-74. doi: 10.1016/j.str.2014.09.019. Epub 2014, Nov 20. PMID:25465127
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (194 Kb) [Save to disk]
  • Biological Unit Coordinates (4v01.pdb1.gz) 96 Kb
  • Biological Unit Coordinates (4v01.pdb2.gz) 95 Kb
  • LPC: Ligand-Protein Contacts for 4V01
  • CSU: Contacts of Structural Units for 4V01
  • Structure Factors (576 Kb)
  • Retrieve 4V01 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4V01 from S2C, [Save to disk]
  • Re-refined 4v01 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4V01 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4V01
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4V01, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4v01] [4v01_A] [4v01_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4V01: [TyrKc ] by SMART
  • Other resources with information on 4V01
  • Community annotation for 4V01 at PDBWiki (http://pdbwiki.org)

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