OCA Atlas for 4W1O

4W1O

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

3GJ, ZN

enzyme

Gene
Ontology

Chain	Function	Process	Component
B, D, A, C

Primary reference

Discovery and early clinical development of 2-{6-[2-(3,5-dichloro-4-pyridyl)acetyl]-2,3-dimethoxyphenoxy}-N-propylacetamide (LEO 29102), a soft-drug inhibitor of phosphodiesterase 4 for topical treatment of atopic dermatitis., Felding J, Sorensen MD, Poulsen TD, Larsen J, Andersson C, Refer P, Engell K, Ladefoged LG, Thormann T, Vinggaard AM, Hegardt P, Sohoel A, Nielsen SF, J Med Chem. 2014 Jul 24;57(14):5893-903. doi: 10.1021/jm500378a. Epub 2014 Jul 1. PMID:24984230

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (223 Kb) [Save to disk]

Biological Unit Coordinates (4w1o.pdb1.gz) 111 Kb

Biological Unit Coordinates (4w1o.pdb2.gz) 111 Kb

LPC: Ligand-Protein Contacts for 4W1O

CSU: Contacts of Structural Units for 4W1O

Structure Factors (857 Kb)

Retrieve 4W1O in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4W1O from S2C, [Save to disk]

Re-refined 4w1o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4W1O in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4w1o] [4w1o_A] [4w1o_B] [4w1o_C] [4w1o_D]

SWISS-PROT database:

Domain found in 4W1O: [HDc ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]