4W79 Crystal Structure of Human Protein N-terminal Glutamine Amidohydrolase date
authors Bitto, E., Bingman, C.A., McCoy, J.G., Wesenberg, G.E., Phillips, G.N., CESG, Center.for.Eukaryotic.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.1699
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand CO3, EDO, MSE, PG4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of human protein N-terminal glutamine amidohydrolase, an initial component of the N-end rule pathway., Park MS, Bitto E, Kim KR, Bingman CA, Miller MD, Kim HJ, Han BW, Phillips GN Jr, PLoS One. 2014 Oct 30;9(10):e111142. doi: 10.1371/journal.pone.0111142., eCollection 2014. PMID:25356641
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (4w79.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 4W79
  • CSU: Contacts of Structural Units for 4W79
  • Structure Factors (732 Kb)
  • Retrieve 4W79 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4W79 from S2C, [Save to disk]
  • Re-refined 4w79 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4W79 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4W79
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4W79, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4w79] [4w79_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4W79
  • Community annotation for 4W79 at PDBWiki (http://pdbwiki.org)

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