4W7Y Dimeric BAP29 vDED with disulfide bonds in crystal contacts date
authors Quistgaard, E.M.
compound source
symmetry
R_factor
R_Free 0.2352
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand ACT, MPD, MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA disulfide polymerized protein crystal., Quistgaard EM, Chem Commun (Camb). 2014 Oct 20. PMID:25327138
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • Biological Unit Coordinates (4w7y.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 4W7Y
  • CSU: Contacts of Structural Units for 4W7Y
  • Structure Factors (135 Kb)
  • Retrieve 4W7Y in mmCIF format [Save to disk]
  • Re-refined 4w7y structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4W7Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4W7Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4W7Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4w7y_B] [4w7y_A] [4w7y]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4W7Y
  • Community annotation for 4W7Y at PDBWiki (http://pdbwiki.org)

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