4W9I date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 3JS, CAS enzyme
Gene
Ontology
ChainFunctionProcessComponent
G, D, J, A


H, E, K, B


Primary referenceStructure-Guided Design and Optimization of Small Molecules Targeting the Protein-Protein Interaction between the von Hippel-Lindau (VHL) E3 Ubiquitin Ligase and the Hypoxia Inducible Factor (HIF) Alpha Subunit with In Vitro Nanomolar Affinities., Galdeano C, Gadd MS, Soares P, Scaffidi S, Van Molle I, Birced I, Hewitt S, Dias DM, Ciulli A, J Med Chem. 2014 Aug 28. PMID:25166285
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (451 Kb) [Save to disk]
  • Biological Unit Coordinates (4w9i.pdb1.gz) 113 Kb
  • Biological Unit Coordinates (4w9i.pdb2.gz) 113 Kb
  • Biological Unit Coordinates (4w9i.pdb3.gz) 114 Kb
  • Biological Unit Coordinates (4w9i.pdb4.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 4W9I
  • CSU: Contacts of Structural Units for 4W9I
  • Structure Factors (1188 Kb)
  • Retrieve 4W9I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4W9I from S2C, [Save to disk]
  • Re-refined 4w9i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4W9I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4w9i] [4w9i_A] [4w9i_B] [4w9i_C] [4w9i_D] [4w9i_E] [4w9i_F] [4w9i_G] [4w9i_H] [4w9i_I] [4w9i_J] [4w9i_K] [4w9i_L]
  • SWISS-PROT database:
  • Domains found in 4W9I: [Skp1] [UBQ ] by SMART

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