4WCX Crystal structure of HydG: A maturase of the [FeFe]-hydrogenase date
authors Dinis, P.C., Harmer, J.E., Driesener, R.C., Roach, P.L.
compound source
symmetry
R_factor
R_Free 0.2134
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.59
ligand ALA, FE, H2S, MET, NA, SAM, SF4 enzyme
Gene THIT
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceX-ray crystallographic and EPR spectroscopic analysis of HydG, a maturase in [FeFe]-hydrogenase H-cluster assembly., Dinis P, Suess DL, Fox SJ, Harmer JE, Driesener RC, De La Paz L, Swartz JR, Essex JW, Britt RD, Roach PL, Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):1362-7. doi: 10.1073/pnas.1417252112., Epub 2015 Jan 20. PMID:25605932
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (305 Kb) [Save to disk]
  • Biological Unit Coordinates (4wcx.pdb1.gz) 151 Kb
  • Biological Unit Coordinates (4wcx.pdb2.gz) 150 Kb
  • LPC: Ligand-Protein Contacts for 4WCX
  • CSU: Contacts of Structural Units for 4WCX
  • Structure Factors (1959 Kb)
  • Retrieve 4WCX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WCX from S2C, [Save to disk]
  • Re-refined 4wcx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WCX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WCX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WCX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wcx] [4wcx_C] [4wcx_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4WCX: [BATS] [Elp3 ] by SMART
  • Other resources with information on 4WCX
  • Community annotation for 4WCX at PDBWiki (http://pdbwiki.org)

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