4WJG Structure of T. brucei haptoglobin-hemoglobin receptor binding to human haptoglobin-hemoglobin date
authors Stoedkilde, K., Torvund-Jensen, M., Moestrup, S.K., Andersen, C.B.F.
compound source
symmetry
R_factor
R_Free 0.2709
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.10
ligand HEM, NAG, OXY enzyme
Gene
Ontology
ChainFunctionProcessComponent
2, M, C, W, H, R


F, K, Z, A, P, U
  • peroxidase activity


  • V, Q, 1, L, B, G
  • peroxidase activity


  • Primary referenceStructural basis for trypanosomal haem acquisition and susceptibility to the host innate immune system., Stodkilde K, Torvund-Jensen M, Moestrup SK, Andersen CB, Nat Commun. 2014 Nov 20;5:5487. doi: 10.1038/ncomms6487. PMID:25410714
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1935 Kb) [Save to disk]
  • Biological Unit Coordinates (4wjg.pdb1.gz) 646 Kb
  • Biological Unit Coordinates (4wjg.pdb2.gz) 646 Kb
  • Biological Unit Coordinates (4wjg.pdb3.gz) 648 Kb
  • LPC: Ligand-Protein Contacts for 4WJG
  • CSU: Contacts of Structural Units for 4WJG
  • Structure Factors (1598 Kb)
  • Retrieve 4WJG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WJG from S2C, [Save to disk]
  • Re-refined 4wjg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WJG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WJG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WJG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wjg_4] [4wjg_X] [4wjg_1] [4wjg] [4wjg_2] [4wjg_S] [4wjg_V] [4wjg_U] [4wjg_Y] [4wjg_Q] [4wjg_T] [4wjg_B] [4wjg_R] [4wjg_W] [4wjg_D] [4wjg_L] [4wjg_H] [4wjg_A] [4wjg_Z] [4wjg_P] [4wjg_C] [4wjg_E] [4wjg_3] [4wjg_M] [4wjg_N] [4wjg_I] [4wjg_K] [4wjg_J] [4wjg_O] [4wjg_F] [4wjg_G]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4WJG: [CCP] [NEAT] [Tryp_SPc ] by SMART
  • Other resources with information on 4WJG
  • Community annotation for 4WJG at PDBWiki (http://pdbwiki.org)

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