4YDU		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A, B C, D metallopeptidase activity
Primary reference	The ATP-mediated formation of the YgjD-YeaZ-YjeE complex is required for the biosynthesis of tRNA t6A in Escherichia coli., Zhang W, Collinet B, Perrochia L, Durand D, van Tilbeurgh H, Nucleic Acids Res. 2015 Jan 10. pii: gku1397. PMID:25578970

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (360 Kb) [Save to disk] Biological Unit Coordinates (4ydu.pdb1.gz) 178 Kb Biological Unit Coordinates (4ydu.pdb2.gz) 178 Kb CSU: Contacts of Structural Units for 4YDU Structure Factors (465 Kb) Retrieve 4YDU in mmCIF format [Save to disk] Re-refined 4ydu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YDU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ydu] [4ydu_A] [4ydu_B] [4ydu_C] [4ydu_D] SWISS-PROT database:

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