4WSX Viral Protein date Oct 28, 2014
title The Crystal Structure Of Hemagglutinin From Ajiangxi-Donghu Influenza Virus
authors H.Yang, P.J.Carney, J.C.Chang, J.M.Villanueva, J.Stevens
compound source
Molecule: Hemagglutinin Ha1 Chain
Chain: A, C, E, G, I, K, M, O, Q, S, U, W
Engineered: Yes
Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Strain: Ajiangxi-Donghu3462013
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111

Molecule: Hemagglutinin Ha2 Chain
Chain: B, D, F, H, J, L, N, P, R, T, V, X
Engineered: Yes

Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Strain: Ajiangxi-Donghu3462013
Expression_system: Trichoplusia Ni
Expression_system_taxid: 7111
symmetry Space Group: C 1 2 1
R_factor 0.243 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
217.395 217.612 146.266 90.00 89.98 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, T, N, V, L, J, X, P, B, H, D, R


S, K, E, Q, M, C, A, O, W, I, G, U


Primary referenceStructure and receptor binding preferences of recombinant hemagglutinins from avian and human H6 and H10 influenza A virus subtypes., Yang H, Carney PJ, Chang JC, Villanueva JM, Stevens J, J Virol. 2015 Feb 11. pii: JVI.03456-14. PMID:25673707
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1995 Kb) [Save to disk]
  • Biological Unit Coordinates (4wsx.pdb1.gz) 505 Kb
  • Biological Unit Coordinates (4wsx.pdb2.gz) 504 Kb
  • Biological Unit Coordinates (4wsx.pdb3.gz) 504 Kb
  • Biological Unit Coordinates (4wsx.pdb4.gz) 506 Kb
  • LPC: Ligand-Protein Contacts for 4WSX
  • CSU: Contacts of Structural Units for 4WSX
  • Structure Factors (3490 Kb)
  • Retrieve 4WSX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WSX from S2C, [Save to disk]
  • Re-refined 4wsx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WSX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WSX
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4WSX, from MSDmotif at EBI
  • Fold representative 4wsx from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wsx_G] [4wsx_M] [4wsx_C] [4wsx_P] [4wsx_L] [4wsx_O] [4wsx_H] [4wsx_K] [4wsx_W] [4wsx_Q] [4wsx_R] [4wsx_J] [4wsx] [4wsx_I] [4wsx_T] [4wsx_E] [4wsx_N] [4wsx_X] [4wsx_V] [4wsx_B] [4wsx_D] [4wsx_S] [4wsx_F] [4wsx_A] [4wsx_U]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WSX
  • Community annotation for 4WSX at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science