4WTU Crystal structure of BACE1 in complex with 2-aminooxazoline 3-aza-4-fluoro-xanthene inhibitor 22 date
authors Whittington, D.A., Long, A.M.
compound source
symmetry
R_factor
R_Free 0.1957
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.85
ligand 3UT, GOL, IOD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAn Orally Available BACE1 Inhibitor That Affords Robust CNS Abeta Reduction without Cardiovascular Liabilities., Cheng Y, Brown J, Judd TC, Lopez P, Qian W, Powers TS, Chen JJ, Bartberger MD, Chen K, Dunn RT 2nd, Epstein O, Fremeau RT Jr, Harried S, Hickman D, Hitchcock SA, Luo Y, Minatti AE, Patel VF, Vargas HM, Wahl RC, Weiss MM, Wen PH, White RD, Whittington DA, Zheng XM, Wood S, ACS Med Chem Lett. 2014 Dec 29;6(2):210-5. doi: 10.1021/ml500458t. eCollection, 2015 Feb 12. PMID:25699151
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (75 Kb) [Save to disk]
  • Biological Unit Coordinates (4wtu.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 4WTU
  • CSU: Contacts of Structural Units for 4WTU
  • Structure Factors (1162 Kb)
  • Retrieve 4WTU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WTU from S2C, [Save to disk]
  • Re-refined 4wtu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WTU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WTU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WTU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wtu] [4wtu_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WTU
  • Community annotation for 4WTU at PDBWiki (http://pdbwiki.org)

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