4WV6 Heterodimer of Importin alpha 1 with nuclear localization signal of TAF8 date
authors Trowitzsch, S.
compound source
symmetry
R_factor
R_Free 0.1799
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.75
ligand EDO enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCytoplasmic TAF2-TAF8-TAF10 complex provides evidence for nuclear holo-TFIID assembly from preformed submodules., Trowitzsch S, Viola C, Scheer E, Conic S, Chavant V, Fournier M, Papai G, Ebong IO, Schaffitzel C, Zou J, Haffke M, Rappsilber J, Robinson CV, Schultz P, Tora L, Berger I, Nat Commun. 2015 Jan 14;6:6011. doi: 10.1038/ncomms7011. PMID:25586196
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (221 Kb) [Save to disk]
  • Biological Unit Coordinates (4wv6.pdb1.gz) 214 Kb
  • LPC: Ligand-Protein Contacts for 4WV6
  • CSU: Contacts of Structural Units for 4WV6
  • Structure Factors (467 Kb)
  • Retrieve 4WV6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WV6 from S2C, [Save to disk]
  • Re-refined 4wv6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WV6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WV6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WV6, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wv6_C] [4wv6_A] [4wv6_B] [4wv6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WV6: [ARM ] by SMART
    • Other resources with information on 4WV6
  • Community annotation for 4WV6 at PDBWiki (http://pdbwiki.org)

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science