4WXQ Crystal Structure of the Myocilin Olfactomedin Domain date
authors Orwig, S.D., Turnage, K.C., Donegan, R.K., Lieberman, R.L.
compound source
symmetry
R_factor
R_Free 0.2306
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.15
ligand CA, NA, P6G enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for misfolding in myocilin-associated glaucoma., Donegan RK, Hill SE, Freeman DM, Nguyen E, Orwig SD, Turnage KC, Lieberman RL, Hum Mol Genet. 2015 Apr 15;24(8):2111-24. doi: 10.1093/hmg/ddu730. Epub 2014 Dec , 18. PMID:25524706
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (4wxq.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 4WXQ
  • CSU: Contacts of Structural Units for 4WXQ
  • Structure Factors (293 Kb)
  • Retrieve 4WXQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WXQ from S2C, [Save to disk]
  • Re-refined 4wxq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WXQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WXQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WXQ, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wxq] [4wxq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WXQ: [OLF ] by SMART
    • Other resources with information on 4WXQ
  • Community annotation for 4WXQ at PDBWiki (http://pdbwiki.org)

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