4WYT Crystal Structure of Scribble PDZ34 tandem at 2.6 Angstroms date
authors Ren, J.Q., Feng, W.
compound source
symmetry
R_factor
R_Free 0.2830
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
ligand CL enzyme
Primary referenceInterdomain interface-mediated target recognition by the Scribble PDZ34 supramodule., Ren J, Feng L, Bai Y, Pei H, Yuan Z, Feng W, Biochem J. 2015 May 15;468(1):133-44. doi: 10.1042/BJ20141473. PMID:25734361
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk]
  • Biological Unit Coordinates (4wyt.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 4WYT
  • CSU: Contacts of Structural Units for 4WYT
  • Structure Factors (86 Kb)
  • Retrieve 4WYT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WYT from S2C, [Save to disk]
  • Re-refined 4wyt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WYT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WYT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wyt] [4wyt_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WYT: [PDZ ] by SMART
  • Other resources with information on 4WYT
  • Community annotation for 4WYT at PDBWiki (http://pdbwiki.org)

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