4WZG Protein Binding date Nov 19, 2014
title Structure Of Human Atg101
authors M.Michel, O.H.Weiergraeber
compound source
Molecule: Autophagy-Related Protein 101
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Atg101, C12orf44, Pp894
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 1 2 1
R_factor 0.198 R_Free 0.220
length a length b length c angle alpha angle beta angle gamma
40.150 42.620 67.210 90.00 97.31 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand BME enzyme

Primary referenceThe mammalian autophagy initiator complex contains two HORMA domain proteins., Michel M, Schwarten M, Decker C, Nagel-Steger L, Willbold D, Weiergraber OH, Autophagy. 2015 Aug 3:0. PMID:26236954
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (4wzg.pdb1.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 4WZG
  • CSU: Contacts of Structural Units for 4WZG
  • Structure Factors (110 Kb)
  • Retrieve 4WZG in mmCIF format [Save to disk]
  • Re-refined 4wzg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WZG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WZG
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4WZG, from MSDmotif at EBI
  • Fold representative 4wzg from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wzg] [4wzg_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WZG
  • Community annotation for 4WZG at PDBWiki (http://pdbwiki.org)

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