4X0O Transferase date Nov 21, 2014
title Beta-Ketoacyl-(Acyl Carrier Protein) Synthase III-2 (Fabh2) Vibrio Cholerae Soaked With Acetyl-Coa
authors J.Hou, M.Chruszcz, H.Zheng, D.R.Cooper, M.D.Chordia, M.D.Zimmerma W.F.Anderson, W.Minor, Center For Structural Genomics Of Infe Diseases (Csgid)
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase 3 Prote
Chain: A, B, C, E, F, G, H
Synonym: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III Prot Beta-Ketoacyl-Acp Synthase III 2,Kas III 2;
Ec: 2.3.1.180
Engineered: Yes
Organism_scientific: Vibrio Cholerae Serotype O1
Organism_taxid: 243277
Strain: Atcc 39315 El Tor Inaba N16961
Gene: Fabh2, Vc_a0751
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7

Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase 3 Prote
Chain: D
Synonym: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase III Prot Beta-Ketoacyl-Acp Synthase III 2,Kas III 2;
Ec: 2.3.1.180
Engineered: Yes

Organism_scientific: Vibrio Cholerae Serotype O1
Organism_taxid: 243277
Strain: Atcc 39315 El Tor Inaba N16961
Gene: Fabh2, Vc_a0751
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21-Codonplus(De3)-Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg7
symmetry Space Group: P 1
R_factor 0.174 R_Free 0.201
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.763 86.980 157.342 90.06 89.96 90.08
method X-Ray Diffractionresolution 2.20 Å
ligand COA, MLI, NA, SCY enzyme Transferase E.C.2.3.1.180 BRENDA
Gene VC
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (921 Kb) [Save to disk]
  • Biological Unit Coordinates (4x0o.pdb1.gz) 229 Kb
  • Biological Unit Coordinates (4x0o.pdb2.gz) 233 Kb
  • Biological Unit Coordinates (4x0o.pdb3.gz) 232 Kb
  • Biological Unit Coordinates (4x0o.pdb4.gz) 234 Kb
  • LPC: Ligand-Protein Contacts for 4X0O
  • CSU: Contacts of Structural Units for 4X0O
  • Structure Factors (3041 Kb)
  • Retrieve 4X0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X0O from S2C, [Save to disk]
  • Re-refined 4x0o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4X0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4X0O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4X0O, from MSDmotif at EBI
  • Fold representative 4x0o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x0o] [4x0o_D] [4x0o_F] [4x0o_E] [4x0o_G] [4x0o_A] [4x0o_B] [4x0o_C] [4x0o_H]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4X0O
  • Community annotation for 4X0O at PDBWiki (http://pdbwiki.org)

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