4X1V Signaling Protein date Nov 25, 2014
title Crystal Structure Of The 2nd Sh3 Domain From Human Cd2ap (Cm Complex With A Proline-Rich Peptide (Aa 76-91) From Human A
authors E.Rouka, T.Krojer, F.Von Delft, S.Knapp, K.H.Kirsch, C.H.Arrowsmi A.M.Edwards, C.Bountra, S.M.Feller, P.C.Simister
compound source
Molecule: Cd2-Associated Protein
Chain: A
Fragment: Unp Residues 109-168
Synonym: Adapter Protein Cms,Cas Ligand With Multiple Sh3 D
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Cd2ap
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008

Molecule: Arf-Gap With Rho-Gap Domain, Ank Repeat And Ph Do Containing Protein 1;
Chain: B
Fragment: Unp Residues 76-91
Synonym: Centaurin-Delta-2,Cnt-D2
Engineered: Yes

Synthetic: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 43
R_factor 0.160 R_Free 0.200
length a length b length c angle alpha angle beta angle gamma
44.590 44.590 32.940 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.58 Å
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (4x1v.pdb1.gz) 14 Kb
  • CSU: Contacts of Structural Units for 4X1V
  • Structure Factors (478 Kb)
  • Retrieve 4X1V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X1V from S2C, [Save to disk]
  • Re-refined 4x1v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4X1V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4X1V
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 4x1v from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x1v] [4x1v_B] [4x1v_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4X1V: [SH3 ] by SMART
  • Other resources with information on 4X1V
  • Community annotation for 4X1V at PDBWiki (http://pdbwiki.org)

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