4X4W Crystal structure of the full-length human mitochondrial CCA-adding enzyme date
authors Kuhn, C.D., Joshua-Tor, L.
compound source
symmetry
R_factor
R_Free 0.1958
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
ligand CL, FLC, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceOn-Enzyme Refolding Permits Small RNA and tRNA Surveillance by the CCA-Adding Enzyme., Kuhn CD, Wilusz JE, Zheng Y, Beal PA, Joshua-Tor L, Cell. 2015 Feb 12;160(4):644-58. doi: 10.1016/j.cell.2015.01.005. Epub 2015 Jan, 29. PMID:25640237
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (411 Kb) [Save to disk]
  • Biological Unit Coordinates (4x4w.pdb1.gz) 403 Kb
  • LPC: Ligand-Protein Contacts for 4X4W
  • CSU: Contacts of Structural Units for 4X4W
  • Structure Factors (828 Kb)
  • Retrieve 4X4W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X4W from S2C, [Save to disk]
  • Re-refined 4x4w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4X4W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4X4W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4X4W, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x4w_B] [4x4w] [4x4w_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4X4W
  • Community annotation for 4X4W at PDBWiki (http://pdbwiki.org)

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