4X4X
Retrofitting antibodies with stabilizing mutations. Herceptin scFv mutant.
date
authors
Langley, D.B., Roome, B., Christ, D.
compound
source
symmetry
R_factor
R_Free
0.26906
crystal
cell
length a
length b
length c
angle alpha
angle beta
angle gamma
method
X-Ray Diffraction
resolution
2.25
Data retrieval
Asymmetric unit, PDB entry:
[header only]
[complete with coordinates]
(138 Kb)
[Save to disk]
Biological Unit Coordinates
(4x4x.pdb1.gz) 132 Kb
CSU:
Contacts of Structural Units
for 4X4X
Structure Factors
(1501 Kb)
Retrieve 4X4X in
mmCIF
format
[Save to disk]
SEQRES to COORDINATES
correlation for
4X4X
from
S2C
,
[Save to disk]
Re-refined
4x4x
structure from
PDB_REDO
, a databank with updated and optimised macromolecular X-ray diffraction structure models
View 4X4X in 3D
Proteopedia
, because life has more than 2D.
On
Jmol
, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
On
FirstGlance
, an excellent tool for a guided tour on the structure components, by
E. Martz
.
Visual 3D analysis of 4X4X
Ramachandran
plot from
PDBSum
Structure-derived information
Electron Density
related parameters from
EDS
Electron Density Server, at Upsala
Dipole
moment, from
Dipole Server
at Weizmann Institute
Sequence-derived information
View one-letter amino acid or nucleotide sequence for each chain:
[4x4x_C]
[4x4x_D]
[4x4x_B]
[4x4x]
[4x4x_A]
SWISS-PROT
database:
Domain
organization of by
SWISSPFAM
Domain
found in 4X4X:
[IGv ]
by
SMART
Other resources with information on 4X4X
Community annotation for
4X4X
at
PDBWiki
(http://pdbwiki.org)
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