4X52 Human PARP13 (ZC3HAV1), C-Terminal PARP Domain (H810N; N830Y variant) date
authors Karlberg, T., Thorsell, A.G., Klepsch, M., Schuler, H.
compound source
symmetry
R_factor
R_Free 0.2330
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.08
ligand GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructural Basis for Lack of ADP-Ribosyltransferase Activity in Poly(ADP-Ribose) Polymerase-13/Zinc Finger Antiviral Protein., Karlberg T, Klepsch M, Thorsell AG, Andersson CD, Linusson A, Schuler H, J Biol Chem. 2015 Jan 29. pii: jbc.M114.630160. PMID:25635049
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (245 Kb) [Save to disk]
  • Biological Unit Coordinates (4x52.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (4x52.pdb2.gz) 62 Kb
  • Biological Unit Coordinates (4x52.pdb3.gz) 62 Kb
  • Biological Unit Coordinates (4x52.pdb4.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 4X52
  • CSU: Contacts of Structural Units for 4X52
  • Structure Factors (437 Kb)
  • Retrieve 4X52 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X52 from S2C, [Save to disk]
  • Re-refined 4x52 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4X52 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4X52
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4X52, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x52] [4x52_D] [4x52_C] [4x52_B] [4x52_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4X52
  • Community annotation for 4X52 at PDBWiki (http://pdbwiki.org)

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