4X92 Crystal structure of Lysosomal Phospholipase A2-S165A date
authors Glukhova, A., Tesmer, J.J.G.
compound source
symmetry
R_factor
R_Free 0.2203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and function of lysosomal phospholipase A2 and lecithin:cholesterol acyltransferase., Glukhova A, Hinkovska-Galcheva V, Kelly R, Abe A, Shayman JA, Tesmer JJ, Nat Commun. 2015 Mar 2;6:6250. doi: 10.1038/ncomms7250. PMID:25727495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (4x92.pdb1.gz) 125 Kb
  • LPC: Ligand-Protein Contacts for 4X92
  • CSU: Contacts of Structural Units for 4X92
  • Structure Factors (777 Kb)
  • Retrieve 4X92 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4X92 from S2C, [Save to disk]
  • Re-refined 4x92 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4X92 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4X92
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4X92, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4x92] [4x92_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4X92
  • Community annotation for 4X92 at PDBWiki (http://pdbwiki.org)

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