4XC2 Crystal structure of GABARAP in complex with KBTBD6 LIR peptide date
authors Huber, J., Genau, H.M., Baschieri, F., Doetsch, V., Farhan, H., Rogov, V.V., Behrends, C., Akutsu, M.
compound source
symmetry
R_factor
R_Free 0.2582
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
Gene HCG
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • chemical synaptic transmissi...

    • Primary referenceCUL3-KBTBD6/KBTBD7 Ubiquitin Ligase Cooperates with GABARAP Proteins to Spatially Restrict TIAM1-RAC1 Signaling., Genau HM, Huber J, Baschieri F, Akutsu M, Dotsch V, Farhan H, Rogov V, Behrends C, Mol Cell. 2015 Feb 11. pii: S1097-2765(14)01018-1. doi:, 10.1016/j.molcel.2014.12.040. PMID:25684205
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (92 Kb) [Save to disk]
  • Biological Unit Coordinates (4xc2.pdb1.gz) 23 Kb
  • Biological Unit Coordinates (4xc2.pdb2.gz) 23 Kb
  • Biological Unit Coordinates (4xc2.pdb3.gz) 23 Kb
  • Biological Unit Coordinates (4xc2.pdb4.gz) 23 Kb
  • CSU: Contacts of Structural Units for 4XC2
  • Structure Factors (2036 Kb)
  • Retrieve 4XC2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XC2 from S2C, [Save to disk]
  • Re-refined 4xc2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XC2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4XC2
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XC2, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xc2_F] [4xc2_A] [4xc2_D] [4xc2_B] [4xc2_E] [4xc2_H] [4xc2_G] [4xc2] [4xc2_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4XC2
  • Community annotation for 4XC2 at PDBWiki (http://pdbwiki.org)

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