4XDP date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, EDO, FE, PG4, PGE, TRS, ZN enzyme
Primary referenceA High-Throughput Mass Spectrometry Assay Coupled with Redox Activity Testing Reduces Artifacts and False Positives in Lysine Demethylase Screening., Wigle TJ, Swinger KK, Campbell JE, Scholle MD, Sherrill J, Admirand EA, Boriack-Sjodin PA, Kuntz KW, Chesworth R, Moyer MP, Scott MP, Copeland RA, J Biomol Screen. 2015 Mar 9. pii: 1087057115575689. PMID:25755264
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (243 Kb) [Save to disk]
  • Biological Unit Coordinates (4xdp.pdb1.gz) 120 Kb
  • Biological Unit Coordinates (4xdp.pdb2.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 4XDP
  • CSU: Contacts of Structural Units for 4XDP
  • Structure Factors (902 Kb)
  • Retrieve 4XDP in mmCIF format [Save to disk]
  • Re-refined 4xdp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XDP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xdp] [4xdp_A] [4xdp_B]
  • SWISS-PROT database:
  • Domains found in 4XDP: [JmjC] [JmjN ] by SMART

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science