4XF5 Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0678), Target EFI-501078, with bound (S)-(+)-2-Amino-1-propanol. date
authors Vetting, M.W., Obaidi, N.F.Al., Toro, R., Morisco, L.L., Benach, J., Wasserman, S.R., Attonito, J.D., Glenn, A.Scott., Chamala, S., Chowdhury, S., Lafleur, J., Love, J., Seidel, R.D., Whalen, K.L., Gerlt, J.A., Almo, S.C., EFI, Enzyme.Function.Initiative.
compound source
symmetry
R_factor
R_Free 0.1910
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
ligand 2A1, CL enzyme
Gene CSAL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (317 Kb) [Save to disk]
  • Biological Unit Coordinates (4xf5.pdb1.gz) 309 Kb
  • LPC: Ligand-Protein Contacts for 4XF5
  • CSU: Contacts of Structural Units for 4XF5
  • Structure Factors (5317 Kb)
  • Retrieve 4XF5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XF5 from S2C, [Save to disk]
  • Re-refined 4xf5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4XF5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4XF5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XF5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xf5_A] [4xf5] [4xf5_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4XF5
  • Community annotation for 4XF5 at PDBWiki (http://pdbwiki.org)

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