4XRR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceStructural Characterization of CalS8, a TDP-alpha-D-Glucose Dehydrogenase Involved in Calicheamicin Aminodideoxypentose Biosynthesis., Singh S, Michalska K, Bigelow L, Endres M, Kharel MK, Babnigg G, Yennamalli RM, Bingman CA, Joachimiak A, Thorson JS, Phillips GN Jr, J Biol Chem. 2015 Oct 23;290(43):26249-58. doi: 10.1074/jbc.M115.673459. Epub, 2015 Aug 3. PMID:26240141
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (282 Kb) [Save to disk]
  • Biological Unit Coordinates (4xrr.pdb1.gz) 275 Kb
  • CSU: Contacts of Structural Units for 4XRR
  • Structure Factors (1428 Kb)
  • Retrieve 4XRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XRR from S2C, [Save to disk]
  • Re-refined 4xrr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xrr_A] [4xrr] [4xrr_B]
  • SWISS-PROT database:
  • Domain found in 4XRR: [UDPG_MGDP_dh_C ] by SMART

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