4XT3 Structure of a viral GPCR bound to human chemokine CX3CL1 date
authors Burg, J.S., Jude, K.M., Waghray, D., Garcia, K.C.
compound source
R_Free 0.3221
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.80
ligand NAG, PCA, PO4, UNL enzyme
  • chemokine receptor activity

  • B

    Primary referenceStructural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor., Burg JS, Ingram JR, Venkatakrishnan AJ, Jude KM, Dukkipati A, Feinberg EN, Angelini A, Waghray D, Dror RO, Ploegh HL, Garcia KC, Science. 2015 Mar 6;347(6226):1113-7. doi: 10.1126/science.aaa5026. PMID:25745166
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (4xt3.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 4XT3
  • CSU: Contacts of Structural Units for 4XT3
  • Structure Factors (49 Kb)
  • Retrieve 4XT3 in mmCIF format [Save to disk]
  • Re-refined 4xt3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XT3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XT3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XT3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xt3_B] [4xt3] [4xt3_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XT3: [SCY ] by SMART
  • Other resources with information on 4XT3
  • Community annotation for 4XT3 at PDBWiki (http://pdbwiki.org)

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