4XZG Crystal structure of HIRAN domain of human HLTF date
authors Ikegaya, Y., Hara, K., Hashimoto, H.
compound source
symmetry
R_factor
R_Free 0.23123
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, I, G


Primary referenceStructure of a Novel DNA-binding Domain of Helicase-like Transcription Factor (HLTF) and Its Functional Implication in DNA Damage Tolerance., Hishiki A, Hara K, Ikegaya Y, Yokoyama H, Shimizu T, Sato M, Hashimoto H, J Biol Chem. 2015 Apr 9. pii: jbc.M115.643643. PMID:25858588
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (360 Kb) [Save to disk]
  • Biological Unit Coordinates (4xzg.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (4xzg.pdb2.gz) 42 Kb
  • Biological Unit Coordinates (4xzg.pdb3.gz) 41 Kb
  • Biological Unit Coordinates (4xzg.pdb4.gz) 41 Kb
  • Biological Unit Coordinates (4xzg.pdb5.gz) 42 Kb
  • Biological Unit Coordinates (4xzg.pdb6.gz) 42 Kb
  • Biological Unit Coordinates (4xzg.pdb7.gz) 43 Kb
  • Biological Unit Coordinates (4xzg.pdb8.gz) 42 Kb
  • Biological Unit Coordinates (4xzg.pdb9.gz) 42 Kb
  • CSU: Contacts of Structural Units for 4XZG
  • Structure Factors (885 Kb)
  • Retrieve 4XZG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4XZG from S2C, [Save to disk]
  • Re-refined 4xzg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4XZG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4XZG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4XZG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4xzg_D] [4xzg_F] [4xzg_H] [4xzg] [4xzg_G] [4xzg_E] [4xzg_A] [4xzg_C] [4xzg_B] [4xzg_I]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4XZG: [HIRAN ] by SMART
  • Other resources with information on 4XZG
  • Community annotation for 4XZG at PDBWiki (http://pdbwiki.org)

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