4Y2D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 7DW, FUC, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, G


F, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (510 Kb) [Save to disk]
  • Biological Unit Coordinates (4y2d.pdb1.gz) 255 Kb
  • Biological Unit Coordinates (4y2d.pdb2.gz) 249 Kb
  • LPC: Ligand-Protein Contacts for 4Y2D
  • CSU: Contacts of Structural Units for 4Y2D
  • Structure Factors (828 Kb)
  • Retrieve 4Y2D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Y2D from S2C, [Save to disk]
  • Re-refined 4y2d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Y2D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y2d] [4y2d_A] [4y2d_B] [4y2d_C] [4y2d_D] [4y2d_E] [4y2d_F] [4y2d_G] [4y2d_H]
  • SWISS-PROT database:
  • Domains found in 4Y2D: [IG] [IG_like] [IGc1] [IGv ] by SMART

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