4Y3O date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, GOL, NI, OGA enzyme
Primary referenceStructure of the JmjC domain-containing protein NO66 complexed with ribosomal protein Rpl8., Wang C, Zhang Q, Hang T, Tao Y, Ma X, Wu M, Zhang X, Zang J, Acta Crystallogr D Biol Crystallogr. 2015 Sep 1;71(Pt 9):1955-64. doi:, 10.1107/S1399004715012948. Epub 2015 Aug 28. PMID:26327385
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (168 Kb) [Save to disk]
  • Biological Unit Coordinates (4y3o.pdb1.gz) 161 Kb
  • LPC: Ligand-Protein Contacts for 4Y3O
  • CSU: Contacts of Structural Units for 4Y3O
  • Structure Factors (1240 Kb)
  • Retrieve 4Y3O in mmCIF format [Save to disk]
  • Re-refined 4y3o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4Y3O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4y3o] [4y3o_A] [4y3o_B] [4y3o_C] [4y3o_D]
  • SWISS-PROT database:
  • Domain found in 4Y3O: [JmjC ] by SMART

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