4Y4Z	Endothiapepsin in complex with fragment 73	date
authors	Schiebel, J., Heine, A., Klebe, G.
compound		source
symmetry		R_factor R_Free 0.1574
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.48
ligand	47R, ACT, EDO, GOL	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	A Small Nonrule of 3 Compatible Fragment Library Provides High Hit Rate of Endothiapepsin Crystal Structures with Various Fragment Chemotypes., Koster H, Craan T, Brass S, Herhaus C, Zentgraf M, Neumann L, Heine A, Klebe G, J Med Chem. 2011 Oct 25. PMID:21972967

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk] Biological Unit Coordinates (4y4z.pdb1.gz) 154 Kb LPC: Ligand-Protein Contacts for 4Y4Z CSU: Contacts of Structural Units for 4Y4Z Structure Factors (450 Kb) Retrieve 4Y4Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y4Z from S2C, [Save to disk] Re-refined 4y4z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y4Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4Y4Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y4z] [4y4z_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4Y4Z

Community annotation for 4Y4Z at PDBWiki (http://pdbwiki.org)

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