4Y5O	Transferase	date	Feb 11, 2015
title	Ccm2 Hhd In Complex With Mekk3 Npb1
authors	O.S.Fisher, T.J.Boggon
compound		source
Molecule: Malcavernin Chain: A Synonym: Cerebral Cavernous Malformations 2 Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Ccm2, C7orf22, Pp10187 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Rosetta (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet32
Molecule: Mitogen-Activated Protein Kinase Kinase Kinase 3 Chain: B Synonym: Mapkerk Kinase Kinase 3,Mekk 3 Ec: 2.7.11.25 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Map3k3, Mapkkk3, Mekk3 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21 (De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pcdf
symmetry	Space Group: P 1 21 1	R_factor 0.208 R_Free 0.232
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.310 45.349 61.533 90.00 94.95 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand		enzyme	Transferase E.C.2.7.11.25 BRENDA
Primary reference	Structure and vascular function of MEKK3-cerebral cavernous malformations 2 complex., Fisher OS, Deng H, Liu D, Zhang Y, Wei R, Deng Y, Zhang F, Louvi A, Turk BE, Boggon TJ, Su B, Nat Commun. 2015 Aug 3;6:7937. doi: 10.1038/ncomms8937. PMID:26235885

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk] Biological Unit Coordinates (4y5o.pdb1.gz) 63 Kb CSU: Contacts of Structural Units for 4Y5O Structure Factors (166 Kb) Retrieve 4Y5O in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y5O from S2C, [Save to disk] Re-refined 4y5o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y5O in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4Y5O

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute Fold representative 4y5o from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y5o] [4y5o_A] [4y5o_B] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4Y5O: [PB1 ] by SMART

Other resources with information on 4Y5O

Community annotation for 4Y5O at PDBWiki (http://pdbwiki.org)

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