OCA Atlas for 4Y73

4Y73

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

SEP, TPO, XPY

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, B, A, C

Primary reference

Discovery of 5-Amino-N-(1H-pyrazol-4-yl)pyrazolo[1,5-a]pyrimidine-3-carboxamide Inhibitors of IRAK4., Lim J, Altman MD, Baker J, Brubaker JD, Chen H, Chen Y, Fischmann T, Gibeau C, Kleinschek MA, Leccese E, Lesburg C, Maclean JK, Moy LY, Mulrooney EF, Presland J, Rakhilina L, Smith GF, Steinhuebel D, Yang R, ACS Med Chem Lett. 2015 Apr 20;6(6):683-8. doi: 10.1021/acsmedchemlett.5b00107., eCollection 2015 Jun 11. PMID:26101574

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk]

Biological Unit Coordinates (4y73.pdb1.gz) 52 Kb

Biological Unit Coordinates (4y73.pdb2.gz) 52 Kb

Biological Unit Coordinates (4y73.pdb3.gz) 52 Kb

Biological Unit Coordinates (4y73.pdb4.gz) 51 Kb

LPC: Ligand-Protein Contacts for 4Y73

CSU: Contacts of Structural Units for 4Y73

Structure Factors (1907 Kb)

Retrieve 4Y73 in mmCIF format [Save to disk]

Re-refined 4y73 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y73 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y73] [4y73_A] [4y73_B] [4y73_C] [4y73_D]

SWISS-PROT database:

Domain found in 4Y73: [STYKc ] by SMART

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]