4Y7F		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	48X, EDO, MN, SO4, UPG	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase., Albesa-Jove D, Mendoza F, Rodrigo-Unzueta A, Gomollon-Bel F, Cifuente JO, Urresti S, Comino N, Gomez H, Romero-Garcia J, Lluch JM, Sancho-Vaello E, Biarnes X, Planas A, Merino P, Masgrau L, Guerin ME, Angew Chem Int Ed Engl. 2015 Jul 1. doi: 10.1002/anie.201504617. PMID:26136334

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk] Biological Unit Coordinates (4y7f.pdb1.gz) 88 Kb LPC: Ligand-Protein Contacts for 4Y7F CSU: Contacts of Structural Units for 4Y7F Structure Factors (154 Kb) Retrieve 4Y7F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4Y7F from S2C, [Save to disk] Re-refined 4y7f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4Y7F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4y7f] [4y7f_A] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---