4YAD date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 4A7, CL, GOL, ZN enzyme
Primary referenceStructure-Guided Design of IACS-9571, a Selective High-Affinity Dual TRIM24-BRPF1 Bromodomain Inhibitor., Palmer WS, Poncet-Montange G, Liu G, Petrocchi A, Reyna N, Subramanian G, Theroff J, Yau A, Kost-Alimova M, Bardenhagen JP, Leo E, Shepard HE, Tieu TN, Shi X, Zhan Y, Zhao S, Draetta G, Toniatti C, Jones P, Geck Do M, Andersen JN, J Med Chem. 2015 Jun 10. PMID:26061247
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (73 Kb) [Save to disk]
  • Biological Unit Coordinates (4yad.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (4yad.pdb2.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 4YAD
  • CSU: Contacts of Structural Units for 4YAD
  • Structure Factors (765 Kb)
  • Retrieve 4YAD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YAD from S2C, [Save to disk]
  • Re-refined 4yad structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YAD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yad] [4yad_A] [4yad_B]
  • SWISS-PROT database:
  • Domains found in 4YAD: [BROMO] [PHD ] by SMART

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