4YBI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand 4B2, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, A


Primary referenceRobust central reduction of amyloid-beta in humans with an orally available, non-peptidic beta-secretase inhibitor., May PC, Dean RA, Lowe SL, Martenyi F, Sheehan SM, Boggs LN, Monk SA, Mathes BM, Mergott DJ, Watson BM, Stout SL, Timm DE, Smith Labell E, Gonzales CR, Nakano M, Jhee SS, Yen M, Ereshefsky L, Lindstrom TD, Calligaro DO, Cocke PJ, Greg Hall D, Friedrich S, Citron M, Audia JE, J Neurosci. 2011 Nov 16;31(46):16507-16. doi: 10.1523/JNEUROSCI.3647-11.2011. PMID:22090477
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (146 Kb) [Save to disk]
  • Biological Unit Coordinates (4ybi.pdb1.gz) 72 Kb
  • Biological Unit Coordinates (4ybi.pdb2.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 4YBI
  • CSU: Contacts of Structural Units for 4YBI
  • Structure Factors (1761 Kb)
  • Retrieve 4YBI in mmCIF format [Save to disk]
  • Re-refined 4ybi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YBI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ybi] [4ybi_A] [4ybi_B]
  • SWISS-PROT database:

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