4YCU	Crystal structure of cladosporin in complex with human lysyl-tRNA synthetase	date
authors	Fang, P., Wang, J., Guo, M.
compound		source
symmetry		R_factor R_Free 0.2128
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.10
ligand	GOL, KRS, LYS	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural Basis for Specific Inhibition of tRNA Synthetase by an ATP Competitive Inhibitor., Fang P, Han H, Wang J, Chen K, Chen X, Guo M, Chem Biol. 2015 Jun 18;22(6):734-44. doi: 10.1016/j.chembiol.2015.05.007. Epub, 2015 Jun 11. PMID:26074468

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (373 Kb) [Save to disk] Biological Unit Coordinates (4ycu.pdb1.gz) 731 Kb LPC: Ligand-Protein Contacts for 4YCU CSU: Contacts of Structural Units for 4YCU Structure Factors (443 Kb) Retrieve 4YCU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4YCU from S2C, [Save to disk] Re-refined 4ycu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4YCU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4YCU

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4YCU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ycu] [4ycu_C] [4ycu_A] [4ycu_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4YCU

Community annotation for 4YCU at PDBWiki (http://pdbwiki.org)

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