4YK6 Crystal structure of APC-ARM in complexed with Amer1-A4 date
authors Zhang, Z., Xiao, Y., Wu, G.
compound source
symmetry
R_factor
R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructures of the APC-ARM domain in complexes with discrete Amer1/WTX fragments reveal that it uses a consensus mode to recognize its binding partners., Zhang Z, Akyildiz S, Xiao Y, Gai Z, An Y, Behrens J, Wu G, Cell Discov. 2015 Jul 14;1:15016. doi: 10.1038/celldisc.2015.16. eCollection, 2015. PMID:27462415
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (4yk6.pdb1.gz) 112 Kb
  • CSU: Contacts of Structural Units for 4YK6
  • Structure Factors (509 Kb)
  • Retrieve 4YK6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YK6 from S2C, [Save to disk]
  • Re-refined 4yk6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YK6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4YK6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yk6_A] [4yk6_B] [4yk6]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4YK6: [ARM ] by SMART
  • Other resources with information on 4YK6
  • Community annotation for 4YK6 at PDBWiki (http://pdbwiki.org)

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