4YLK Crystal structure of DYRK1A in complex with 10-Chloro-substituted 11H-indolo[3,2-c]quinolone-6-carboxylic acid inhibitor 5s date
authors Chaikuad, A., Falke, H., Krojer, T., Delft, F.von., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Kunick, C., Knapp, S., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.17671
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.40
ligand 4E2, EDO, IOD, PTR, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference10-Iodo-11H-indolo[3,2-c]quinoline-6-carboxylic Acids Are Selective Inhibitors of DYRK1A., Falke H, Chaikuad A, Becker A, Loaec N, Lozach O, Abu Jhaisha S, Becker W, Jones PG, Preu L, Baumann K, Knapp S, Meijer L, Kunick C, J Med Chem. 2015 Mar 23. PMID:25730262
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (4ylk.pdb1.gz) 128 Kb
  • LPC: Ligand-Protein Contacts for 4YLK
  • CSU: Contacts of Structural Units for 4YLK
  • Structure Factors (1449 Kb)
  • Retrieve 4YLK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YLK from S2C, [Save to disk]
  • Re-refined 4ylk structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4YLK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4YLK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4YLK, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ylk] [4ylk_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4YLK: [S_TKc ] by SMART
  • Other resources with information on 4YLK
  • Community annotation for 4YLK at PDBWiki (http://pdbwiki.org)

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