4YNY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PCA enzyme
Primary referenceTailored placement of a turn-forming PA tag into the structured domain of a protein to probe its conformational state., Fujii Y, Matsunaga Y, Arimori T, Kitago Y, Ogasawara S, Kaneko MK, Kato Y, Takagi J, J Cell Sci. 2016 Feb 12. pii: jcs.176685. PMID:26872787
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (283 Kb) [Save to disk]
  • Biological Unit Coordinates (4yny.pdb1.gz) 140 Kb
  • Biological Unit Coordinates (4yny.pdb2.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 4YNY
  • CSU: Contacts of Structural Units for 4YNY
  • Structure Factors (2284 Kb)
  • Retrieve 4YNY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4YNY from S2C, [Save to disk]
  • Re-refined 4yny structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4YNY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4yny] [4yny_A] [4yny_B] [4yny_C] [4yny_D]
  • SWISS-PROT database:
  • Domains found in 4YNY: [IG_like] [IGv ] by SMART

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